Uloadit
Apparently, something on the DC 24 Volt power buss has failed resulting in a short to ground. This happened almost surely as a result of a voltage spike on the buss when the neg connection to the battery fell off. You'll have to track it down by disconnecting things one at a time until the short goes away. I would start by disconnecting the fuel pumps at the connectors (are those called Packard connectors?) in the wires hanging below the control box.
I'll bet you will find that one or more of the fuel pump EMI filters has developed a hard short to ground. If you are lucky, the pump itself will still be OK and you can run your genny without the EMI filter(s).
If that's not the problem, I'd next suspect the battery charging regulator. But that doesn't sound like the symptoms you are seeing.
Best of luck,
Richard