The flywheel housing on the a2 8.3's are SAE #2 bolt circle, but are unique to the Allison trans that is behind them, as they are not "standard" depth. They are approximately 1" deeper to make room for the large Allison torque converter. So, with that, on any other engine you'd slam in there, you'd have to also find their unique flywheel housing which would have been used with such Allison trans if you were keeping that as well, which I assume you are. Not all Allison's use this unique engine side flywheel housing. Not sure, but this could be a pain in the *** to find. I think the Allison MT654CR is kind of old/rare in non-military applications?
I have a super clean DT466E for $2,000, Cummins 8.3L out of my M925a2 for $4,500 (not yet removed), or an ISX Signature 600 15L (600hp) non-EGR engine for $9,000. All complete and great runners, can demo any to start and run properly. The ISX and DT are on run stands, the 8.3L is currently in my truck as it originally came, 20,000 miles on it now, 11,000 when I bought it 6 years ago. Oil changed every 2,000 miles since I've had it, injection pump never touched. Complete with modern gear reduction starter, 130 amp genuine Delco alternator, and genuine Sanden high capacity A/C compressor, driven off the serpentine belt, passenger side. 120V block and oil pan heaters added. Mechanical lift pump recently replaced. Truck reaches and holds 67mph any day of the week, even with a load.
I agree with 2-stroker, pull your head and see what you have first. I'd guess you have a cylinder liner that got ate through from coolant cavitation. You can pull the injectors and use a compression tester adapter to blow compressed air into each cylinder. Back the valves off, and see where the air is coming out of. 8.3L head gaskets usually don't just let go unless the pump/boost/timing are turned way up, or it was overheated pretty badly. You can also pull the injectors and go into each cylinder with a scope, they are pretty cheap now. Even my local lawn mower shop has and uses one with great results.