That system was designed to be run while on the trailer. The generator enclosure is not able to standalone on the floor. Likewise, the ECU is not a floor unit. When sold to stand on the ground, the generator had a different enclosure and base frame and the ECU sat on a little cart with wheels and stabilizer legs. If you sit that ECU on the ground it crushes the water drain pipe underneath.
If you made a base frame that recreates the profile of the trailer you could maybe sit the generator on that but then you have to forklift it everywhere. Easier to leave it on the trailer and use from there.
As for the ECU, you could fab a frame to go underneath it. If that is the case you move the two blue temp controllers from the flap down panel on the generator and mount them on the door of the ECU electrical panel. You also need to move S1 and S2 as well as the yellow and orange indicator lights from the same panel...by this point you are working hard IMHO.
The reason those components were not removable for floor use was that system was for a specific Gov requirement and the weight limit was the 4200 lb towing capacity of the heavy HMMWV. It had to be total system weight 4200lb or less for gen, trailer, ECU and shelter. The decision was made to use the trailer as the base frame and save weight.
If you do remove the ECU and use the generator on its own, be advised, if you take the 600lb ECU off the front and stand on the back deck of the trailer without the stabilizer legs down, the nose flips up on the trailer...FAST....total butt clencher of a moment!!